Positive selection and heat‐response transcriptomes reveal adaptive features of the Brassicaceae desert model, Anastatica hierochuntica

Eshel, G. et al. (2022) Positive selection and heat‐response transcriptomes reveal adaptive features of the Brassicaceae desert model, Anastatica hierochuntica. New Phytologist, 236(3), pp. 1006-1026. (doi: 10.1111/nph.18411) (PMID:35909295) (PMCID:PMC9804903)

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Abstract

Plant adaptation to a desert environment and its endemic heat stress is poorly understood at the molecular level. The naturally heat-tolerant Brassicaceae species Anastatica hierochuntica is an ideal extremophyte model to identify genetic adaptations that have evolved to allow plants to tolerate heat stress and thrive in deserts. We generated an A. hierochuntica reference transcriptome and identified extremophyte adaptations by comparing Arabidopsis thaliana and A. hierochuntica transcriptome responses to heat, and detecting positively selected genes in A. hierochuntica. The two species exhibit similar transcriptome adjustment in response to heat and the A. hierochuntica transcriptome does not exist in a constitutive heat ‘stress-ready’ state. Furthermore, the A. hierochuntica global transcriptome as well as heat-responsive orthologs, display a lower basal and higher heat-induced expression than in A. thaliana. Genes positively selected in multiple extremophytes are associated with stomatal opening, nutrient acquisition, and UV-B induced DNA repair while those unique to A. hierochuntica are consistent with its photoperiod-insensitive, early-flowering phenotype. We suggest that evolution of a flexible transcriptome confers the ability to quickly react to extreme diurnal temperature fluctuations characteristic of a desert environment while positive selection of genes involved in stress tolerance and early flowering could facilitate an opportunistic desert lifestyle.

Item Type:Articles
Status:Published
Refereed:Yes
Glasgow Author(s) Enlighten ID:Amtmann, Professor Anna
Authors: Eshel, G., Duppen, N., Wang, G., Oh, D.‐H., Kazachkova, Y., Herzyk, P., Amtmann, A., Gordon, M., Chalifa‐Caspi, V., Oscar, M. A., Bar‐David, S., Marshall‐Colon, A., Dassanayake, M., and Barak, S.
College/School:College of Medical Veterinary and Life Sciences > School of Molecular Biosciences
Journal Name:New Phytologist
Publisher:Wiley
ISSN:0028-646X
ISSN (Online):1469-8137
Published Online:31 July 2022
Copyright Holders:Copyright © 2022 The Authors. New Phytologist and New Phytologist Foundation
First Published:First published in New Phytologist 236(3): 1006-1026
Publisher Policy:Reproduced under a Creative Commons License

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Project CodeAward NoProject NamePrincipal InvestigatorFunder's NameFunder RefLead Dept
302195Combining chemical priming and quantitative genetics to increase salt tolerance of soybeanAnna AmtmannBiotechnology and Biological Sciences Research Council (BBSRC)BB/R019894/1Institute of Molecular, Cell & Systems Biology