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Gao, H., Murugesan, B., Hoßbach, J., Evans, S. K., Stark, W. M. and Smith, M. C.M. (2019) Integrating vectors for genetic studies in the rare Actinomycete Amycolatopsis marina. BMC Biotechnology, 19, 32. (doi: 10.1186/s12896-019-0521-y) (PMID:31164159) (PMCID:PMC6549336)
Zhao, J., Pokhilko, A., Ebenhöh, O., Rosser, S. J. and Colloms, S. D. (2019) A single-input binary counting module based on serine integrase site-specific recombination. Nucleic Acids Research, 47(9), pp. 4896-4909. (doi: 10.1093/nar/gkz245) (PMID:30957849) (PMCID:PMC6511857)
Pokhilko, A., Ebenhöh, O., Stark, W. M. and Colloms, S. D. (2018) Mathematical model of a serine integrase-controlled toggle switch with a single input. Journal of the Royal Society: Interface, 15(143), 20180160. (doi: 10.1098/rsif.2018.0160) (PMID:29875284) (PMCID:PMC6030632)
Fogg, P. C.M., Younger, E., Fernando, B. D., Khaleel, T., Stark, W. M. and Smith, M. C.M. (2018) Recombination directionality factor gp3 binds ϕC31 integrase via the zinc domain, potentially affecting the trajectory of the coiled-coil motif. Nucleic Acids Research, 46(3), pp. 1308-1320. (doi: 10.1093/nar/gkx1233) (PMID:29228292) (PMCID:PMC5814800)
Pokhilko, A. (2017) Monitoring of nutrient limitation in growing E. coli: A mathematical model of a ppGpp-based biosensor. BMC Systems Biology, 11, 106. (doi: 10.1186/s12918-017-0490-5) (PMID:29157236) (PMCID:PMC5697348)
Olorunniji, F. J., McPherson, A. L., Rosser, S. J., Smith, M. C.M., Colloms, S. D. and Stark, W. M. (2017) Control of serine integrase recombination directionality by fusion with the directionality factor. Nucleic Acids Research, 45(14), pp. 8635-8645. (doi: 10.1093/nar/gkx567) (PMID:28666339) (PMCID:PMC5737554)
Stark, W. M. (2017) Making serine integrases work for us. Current Opinion in Microbiology, 38, pp. 130-136. (doi: 10.1016/j.mib.2017.04.006) (PMID:28599144)
Fogg, P. C.M., Haley, J. A., Stark, W. M. and Smith, M. C.M. (2017) Genome integration and excision by a new Streptomyces Bacteriophage ϕJoe. Applied and Environmental Microbiology, 83(5), e02767-16. (doi: 10.1128/AEM.02767-16) (PMID:28003200) (PMCID:PMC5311408)
Pokhilko, A., Zhao, J., Ebenhöh, O., Smith, M. C.M., Stark, W. M. and Colloms, S. D. (2016) The mechanism of φC31 integrase directionality: experimental analysis and computational modelling. Nucleic Acids Research, 44(15), pp. 7360-7372. (doi: 10.1093/nar/gkw616) (PMID:27387286) (PMCID:PMC5009753)
Pokhilko, A., Zhao, J., Stark, W. M. , Colloms, S. D. and Ebenhöh, O. (2016) A simplified mathematical model of directional DNA site-specific recombination by serine integrases. Journal of the Royal Society: Interface, 14, 20160618. (doi: 10.1098/rsif.2016.0618) (PMID:28077763) (PMCID:PMC5310728)
Olorunniji, F. J., McPherson, A. L., Pavlou, H. J., McIlwraith, M. J., Brazier, J. A., Cosstick, R. and Stark, W. M. (2015) Nicked-site substrates for a serine recombinase reveal enzyme–DNA communications and an essential tethering role of covalent enzyme–DNA linkages. Nucleic Acids Research, (doi: 10.1093/nar/gkv521) (PMID:25990737) (PMCID:PMC4499144))
Fogg, P. C.M., Colloms, S. , Rosser, S., Stark, M. and Smith, M. C.M. (2014) New applications for phage integrases. Journal of Molecular Biology, 426(15), pp. 2703-2716. (doi: 10.1016/j.jmb.2014.05.014) (PMID:24857859) (PMCID:PMC4111918)
Colloms, S.D. , Merrick, C.A., Olorunniji, F.J., Stark, W.M. , Smith, M.C.M., Osbourn, A., Keasling, J.D. and Rosser, S.J. (2014) Rapid metabolic pathway assembly and modification using serine integrase site-specific recombination. Nucleic Acids Research, 42(4), e23. (doi: 10.1093/nar/gkt1101) (PMID:24225316) (PMCID:PMC3936721)