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Sanz-Frasquet, C., Ciges-Tomas, J. R., Alite, C., Penadés, J. R. and Marina, A. (2023) The bacteriophage–phage-inducible chromosomal island arms race designs an interkingdom inhibitor of dUTPases. Microbiology Spectrum, 11(1), e0323222. (doi: 10.1128/spectrum.03232-22) (PMID:36622213) (PMCID:PMC9927489)
Alqurainy, N., Miguel-Romero, L., Moura de Sousa, J., Chen, J., Rocha, E. P.C., Fillol-Salom, A. and Penadés, J. R. (2023) A widespread family of phage-inducible chromosomal islands only steals bacteriophage tails to spread in nature. Cell Host and Microbe, 31(1), 69-82.e5. (doi: 10.1016/j.chom.2022.12.001) (PMID:36596306)
Gorzynski, J., Wee, B., Llano, M., Alves, J., Cameron, R., McMenamin, J., Smith, A. , Lindsay, D. and Fitzgerald, J. R. (2022) Epidemiological analysis of Legionnaires' disease in Scotland: a genomic study. Lancet Microbe, 3(11), e835-e845. (doi: 10.1016/S2666-5247(22)00231-2) (PMID:36240833)
Miguel-Romero, L., Alqasmi, M., Bacarizo, J., Tan, J. A., Cogdell, R. J. , Chen, J., Byron, O. , Christie, G. E., Marina, A. and Penadés, J. R. (2022) Non-canonical Staphylococcus aureus pathogenicity island repression. Nucleic Acids Research, 50(19), pp. 11109-11127. (doi: 10.1093/nar/gkac855) (PMID:36200825) (PMCID:PMC9638917)
Fillol-Salom, A., Rostøl, J. T., Ojiogu, A. D., Chen, J., Douce, G. , Humphrey, S. and Penadés, J. R. (2022) Bacteriophages benefit from mobilizing pathogenicity islands encoding immune systems against competitors. Cell, 185(17), 3248-3262.e20. (doi: 10.1016/j.cell.2022.07.014) (PMID:35985290)
Gallego del Sol, F., Quiles-Puchalt, N., Brady, A., Penadés, J. R. and Marina, A. (2022) Insights into the mechanism of action of the arbitrium communication system in SPbeta phages. Nature Communications, 13, 3627. (doi: 10.1038/s41467-022-31144-3) (PMID:35750663) (PMCID:PMC9232636)
Ibarra-Chávez, R., Brady, A., Chen, J., Penadés, J. R. and Haag, A. F. (2022) Phage-inducible chromosomal islands promote genetic variability by blocking phage reproduction and protecting transductants from phage lysis. PLoS Genetics, 18(3), e1010146. (doi: 10.1371/journal.pgen.1010146) (PMID:35344558) (PMCID:PMC8989297)
Wee, B. A. et al. (2021) Population analysis of Legionella pneumophila reveals a basis for resistance to complement-mediated killing. Nature Communications, 12, 7165. (doi: 10.1038/s41467-021-27478-z) (PMID:34887398) (PMCID:PMC8660822)
Fillol-Salom, A. , Bacigalupe, R., Humphrey, S. , Chiang, Y. N., Chen, J. and Penadés, J. R. (2021) Lateral transduction is inherent to the life cycle of the archetypical Salmonella phage P22. Nature Communications, 12, 6510. (doi: 10.1038/s41467-021-26520-4) (PMID:34751192) (PMCID:PMC8575938)
Humphrey, S. , Fillol-Salom, A. , Quiles-Puchalt, N., Ibarra-Chávez, R., Haag, A. F. , Chen, J. and Penadés, J. R. (2021) Bacterial chromosomal mobility via lateral transduction exceeds that of classical mobile genetic elements. Nature Communications, 12, 6509. (doi: 10.1038/s41467-021-26004-5) (PMID:34750368) (PMCID:PMC8575950)
Humphrey, S. , San Millán, Á., Toll-Riera, M., Connolly, J., Flor-Duro, A., Chen, J., Ubeda, C., MacLean, R. C. and Penadés, J. R. (2021) Staphylococcal phages and pathogenicity islands drive plasmid evolution. Nature Communications, 12, 5845. (doi: 10.1038/s41467-021-26101-5) (PMID:34615859) (PMCID:PMC8494744)
Haag, A. F. , Podkowik, M., Ibarra-Chávez, R., Gallego del Sol, F., Ram, G., Chen, J., Marina, A., Novick, R. P. and Penadés, J. R. (2021) A regulatory cascade controls Staphylococcus aureus pathogenicity island activation. Nature Microbiology, 6(10), pp. 1300-1308. (doi: 10.1038/s41564-021-00956-2) (PMID:34518655) (PMCID:PMC7611864)
Yebra, G. et al. (2021) Radical genome remodelling accompanied the emergence of a novel host-restricted bacterial pathogen. PLoS Pathogens, 17(5), e1009606. (doi: 10.1371/journal.ppat.1009606) (PMID:34015034) (PMCID:PMC8171923)
Ibarra-Chávez, R., Haag, A. F. , Dorado-Morales, P., Lasa, I. and Penadés, J. R. (2020) Rebooting synthetic phage-inducible chromosomal islands: one method to forge them all. BioDesign Research, 2020, 5783064. (doi: 10.34133/2020/5783064)
Bacigalupe, R., Tormo-Mas, M. Á., Penades, J. R. and Fitzgerald, J. R. (2019) A multihost bacterial pathogen overcomes continuous population bottlenecks to adapt to new host species. Science Advances, 5(11), eaax0063. (doi: 10.1126/sciadv.aax0063) (PMID:31807698) (PMCID:PMC6881152)