Husmeier, D. (2006) Detecting mosaic structures in DNA sequence alignments. In: Misra, J.C. (ed.) Biomathematics: Modelling and Simulation. World Scientific: Hackensack, NJ, USA, pp. 1-35. ISBN 9789812381101 (doi: 10.1142/9789812774859_0001)
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Publisher's URL: http://www.worldscientific.com/worldscibooks/10.1142/5058
Abstract
This article first provides a concise introduction to the statistical approach to phyloge- netics. It then describes a new method for detecting mosaic structures in DNA sequence alignments, which is based on combining two probabilistic graphical models: (1) a taxon graph (phylogenetic tree) representing the relationships among the taxa, and (2) a site graph (hidden Markov model) representing spatial correlations between nucleotides.
| Item Type: | Book Sections |
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| Additional Information: | iomathematics: Modelling and Simulation, J.C. Misra, Copyright @ 2006 with permission from World Scientific Publishing Co. Pte. Ltd. |
| Status: | Published |
| Glasgow Author(s) Enlighten ID: | Husmeier, Professor Dirk |
| Authors: | Husmeier, D. |
| College/School: | College of Science and Engineering > School of Mathematics and Statistics > Statistics |
| Publisher: | World Scientific |
| ISBN: | 9789812381101 |
| Copyright Holders: | Copyright © 2006 World Scientific Publishing Co. |
| Publisher Policy: | Reproduced with the permission of the publisher |
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