Coupling Differential Centrifugation with Exonuclease Treatment and Size Exclusion Chromatography (DIFSEC) for purification of mtDNA from mammalian cells

Shaw, A. M. and Gammage, P. A. (2023) Coupling Differential Centrifugation with Exonuclease Treatment and Size Exclusion Chromatography (DIFSEC) for purification of mtDNA from mammalian cells. In: Mitochondrial DNA: Methods and Protocols. Series: Methods in molecular biology (2615). Springer: New York, pp. 31-40. ISBN 9781071629215

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Publisher's URL: https://link.springer.com/protocol/10.1007/978-1-0716-2922-2_3

Abstract

Direct analysis of mtDNA using PCR-free methods is limited by the presence of persistent, contaminating nucleic acids originating from the nuclear genome, even following stringent mitochondrial isolations. Here we describe a method developed in our laboratory that couples existing, commercially available mtDNA isolation protocols with exonuclease treatment and size exclusion chromatography (DIFSEC). This protocol produces highly enriched mtDNA extracts from small-scale cell culture, with near-undetectable nuclear DNA contamination.

Item Type:Book Sections
Additional Information:eISBN: 9781071629222
Status:Published
Refereed:Yes
Glasgow Author(s) Enlighten ID:Gammage, Dr Payam
Authors: Shaw, A. M., and Gammage, P. A.
College/School:College of Medical Veterinary and Life Sciences > School of Cancer Sciences
Research Group:Gammage
Publisher:Springer
ISBN:9781071629215
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