Reaction kinetics using a Chemputable framework for data collection and analysis

Matysiak, B. M., Thomas, D. and Cronin, L. (2024) Reaction kinetics using a Chemputable framework for data collection and analysis. Angewandte Chemie (International Edition), 63(9), e202315207. (doi: 10.1002/anie.202315207) (PMID:38155102)

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Abstract

Automated chemistry platforms have been widely explored, but many focus on fixed tasks for chemical synthesis or analysis. However, a typical synthetic chemistry workflow utilizes both, such as kinetic measurements for reaction development and optimization. Due to their repetitive and time-consuming nature, kinetic measurements are often omitted, which limits the mechanistic investigation of reactions. Herein, we present a ‘Chemputer’ platform with on-line analytics (UV-Vis, NMR) which automates routine kinetic measurements. The system’s capabilities are showcased by exploring an inverse electron-demand Diels-Alder using initial rate measurements, a metal complexation using variable time normalization analysis (VTNA), and formation of a series of tosylamide derivatives using Hammett analysis. Over 60 individual experiments are presented which required minimal intervention, highlighting the significant time savings of automation. Owing to the modular design of the platform, which facilitates rapid integration of commercial analytical tools, our approach is widely accessible and adjustable to the reaction under investigation. The platform is operated using the chemical programming language, XDL, hence experimental procedures and results are stored in a precise, computer-readable format. We propose that widespread adoption of this reporting protocol in the chemical community could build a database of validated kinetic data beneficial for Machine Learning.

Item Type:Articles
Additional Information:The authors gratefully acknowledge financial support from the EPSRC (Grant Nos. EP/L023652/1, EP/R020914/1, EP/S030603/1, EP/R01308X/1, EP/S017046/1, and EP/S019472/1), the ERC (Project No. 670467 SMART-POM), the EC (Project No. 766975 MADONNA), and DARPA (Project Nos. W911NF-18- 2-0036, W911NF-17-1-0316, and HR001119S0003).
Keywords:Kinetic, chemputation, XDL, programming, reaction mechanism.
Status:Published
Refereed:Yes
Glasgow Author(s) Enlighten ID:Thomas, Dr Dean and Cronin, Professor Lee and Matysiak, Bartosz
Authors: Matysiak, B. M., Thomas, D., and Cronin, L.
College/School:College of Science and Engineering > School of Chemistry
Journal Name:Angewandte Chemie (International Edition)
Publisher:Wiley
ISSN:1433-7851
ISSN (Online):1521-3773
Published Online:28 December 2023
Copyright Holders:Copyright © 2023 The Authors
First Published:First published in Angewandte Chemie (International Edition) 263(9): e202315207023
Publisher Policy:Reproduced under a Creative Commons License
Data DOI:10.5281/zenodo.10368978

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Project CodeAward NoProject NamePrincipal InvestigatorFunder's NameFunder RefLead Dept
190796Programmable 'Digital' Synthesis for Discovery and Scale-up of Molecules, Clusters and NanomaterialsLeroy CroninEngineering and Physical Sciences Research Council (EPSRC)EP/L023652/1Chemistry
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304037EPSRC International Centre-to-Centre CroninLeroy CroninEngineering and Physical Sciences Research Council (EPSRC)EP/S030603/1Chemistry
300591Programmable Molecular Metal Oxides (PMMOs) - From Fundamentals to ApplicationLeroy CroninEngineering and Physical Sciences Research Council (EPSRC)EP/R01308X/1Chemistry
3026673DSynth: Design and fabrication of cartridges for digital chemical synthesisLeroy CroninEngineering and Physical Sciences Research Council (EPSRC)EP/S017046/1Chemistry
303747Digital-Chemical-Robotics for Translation of Code to Molecules and Complex Chemical SystemsLeroy CroninEngineering and Physical Sciences Research Council (EPSRC)EP/S019472/1Chemistry
172151SMARTPOM: Artificial-Intelligence Driven Discovery and Synthesis of Polyoxometalate ClustersLeroy CroninEuropean Research Council (ERC)670467Chemistry
302959Microbial deployment of new-to-nature chemistries for refactoring the barriers between living and non-living matterLeroy CroninEuropean Commission (EC)766975Chemistry
300851Programmable Multiplexed Droplets and Arrays Containing Reaction NetworksLeroy CroninDefense Advanced Research Projects Agency (DARPA)W911NF-18-2-0036Chemistry