Buchan, D.W.A., Ward, S.M., Lobley, A.E., Nugent, T.C.O., Bryson, K. and Jones, D.T. (2010) Protein annotation and modelling servers at University College London. Nucleic Acids Research, 38(Suppl2), W563-W568. (doi: 10.1093/nar/gkq427) (PMID:20507913) (PMCID:PMC2896093)
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Abstract
The UCL Bioinformatics Group web portal offers several high quality protein structure prediction and function annotation algorithms including PSIPRED, pGenTHREADER, pDomTHREADER, MEMSAT, MetSite, DISOPRED2, DomPred and FFPred for the prediction of secondary structure, protein fold, protein structural domain, transmembrane helix topology, metal binding sites, regions of protein disorder, protein domain boundaries and protein function, respectively. We also now offer a fully automated 3D modelling pipeline: BioSerf, which performed well in CASP8 and uses a fragment-assembly approach which placed it in the top five servers in the de novo modelling category. The servers are available via the group web site at http://bioinf.cs.ucl.ac.uk/.
Item Type: | Articles |
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Status: | Published |
Refereed: | No |
Glasgow Author(s) Enlighten ID: | Bryson, Dr Kevin |
Authors: | Buchan, D.W.A., Ward, S.M., Lobley, A.E., Nugent, T.C.O., Bryson, K., and Jones, D.T. |
College/School: | College of Science and Engineering > School of Computing Science |
Journal Name: | Nucleic Acids Research |
Publisher: | Oxford University Press |
ISSN: | 0305-1048 |
ISSN (Online): | 1362-4962 |
Published Online: | 27 May 2010 |
Copyright Holders: | Copyright © 2010 The Authors |
First Published: | First published in Nucleic Acids Research 38(suppl_2): W563-E568 |
Publisher Policy: | Reproduced under a Creative Commons License |
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