Harvey, W. T., Davies, V. , Daniels, R. S., Whittaker, L., Gregory, V., Hay, A. J., Husmeier, D. , McCauley, J. W. and Reeve, R. (2023) A Bayesian approach to incorporate structural data into the mapping of genotype to antigenic phenotype of influenza A(H3N2) viruses. PLoS Computational Biology, 19(3), e1010885. (doi: 10.1371/journal.pcbi.1010885) (PMID:36972311) (PMCID:PMC10079231)

Iannucci, S., Harvey, W. T., Hughes, J. , Robertson, D. L. , Poyade, M. and Hutchinson, E. (2023) The SARS-CoV-2 Spike Protein Mutation Explorer: using an interactive application to improve the public understanding of SARS-CoV-2 variants of concern. Journal of Visual Communication in Medicine, 46(3), pp. 122-132. (doi: 10.1080/17453054.2023.2237087) (PMID:37526402) (PMCID:PMC10726978)

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Davis, C. et al. (2021) Reduced neutralisation of the Delta (B.1.617.2) SARS-CoV-2 variant of concern following vaccination. PLoS Pathogens, 17(12), e1010022. (doi: 10.1371/journal.ppat.1010022) (PMID:34855916) (PMCID:PMC8639073)

Harvey, W. T. et al. (2021) SARS-CoV-2 variants, spike mutations and immune escape. Nature Reviews Microbiology, 19(7), pp. 409-424. (doi: 10.1038/s41579-021-00573-0) (PMID:34075212) (PMCID:PMC8167834)

Peacock, T. P., Sealy, J. E., Harvey, W. T., Benton, D. J., Reeve, R. and Iqbal, M. (2021) Genetic determinants of receptor-binding preference and zoonotic potential of H9N2 avian influenza viruses. Journal of Virology, 95(5), e01651-20. (doi: 10.1128/JVI.01651-20) (PMID:33268517) (PMCID:PMC8092835)

Harvey, W. T., Mulatti, P., Fusaro, A., Scolamacchia, F., Zecchin, B., Monne, I. and Marangon, S. (2021) Spatiotemporal reconstruction and transmission dynamics during the 2016-17 H5N8 highly pathogenic avian influenza epidemic in Italy. Transboundary and Emerging Diseases, 68(1), pp. 37-50. (doi: 10.1111/tbed.13420) (PMID:31788978)

Scolamacchia, F., Mulatti, P., Mazzucato, M., Barbujani, M., Harvey, W. T., Fusaro, A., Monne, I. and Marangon, S. (2021) Different environmental gradients associated to the spatiotemporal and genetic pattern of the H5N8 highly pathogenic avian influenza outbreaks in poultry in Italy. Transboundary and Emerging Diseases, 68(1), pp. 152-167. (doi: 10.1111/tbed.13661) (PMID:32613724)

Maake, L., Harvey, W., Rotherham, L., Opperman, P. A., Theron, J., Reeve, R. and Maree, F. F. (2020) Genetic basis of antigenic variation of SAT3 foot-and-mouth disease virus. Frontiers in Veterinary Science, 7, 568. (doi: 10.3389/fvets.2020.00568) (PMID:33102544) (PMCID:PMC7506032)

Forde, T. L. , Kollanandi Ratheesh, N., Harvey, W. T., Thomson, J. R., Williamson, S., Biek, R. and Opriessnig, T. (2020) Genomic and immunogenic protein diversity of Erysipelothrix rhusiopathiae isolated from pigs in Great Britain: implications for vaccine protection. Frontiers in Microbiology, 11, 418. (doi: 10.3389/fmicb.2020.00418) (PMID:32231655) (PMCID:PMC7083082)

Davies, V. , Harvey, W. T., Reeve, R. and Husmeier, D. (2019) Improving the identification of antigenic sites in the H1N1 Influenza virus through accounting for the experimental structure in a sparse hierarchical Bayesian model. Journal of the Royal Statistical Society: Series C (Applied Statistics), 68(4), pp. 859-885. (doi: 10.1111/rssc.12338) (PMID:31598013) (PMCID:PMC6774336)

Peacock, T. P., Harvey, W. T., Sadeyen, J.-R., Reeve, R. and Iqbal, M. (2018) The molecular basis of antigenic variation among A(H9N2) avian influenza viruses. Emerging Microbes and Infections, 7, 176. (doi: 10.1038/s41426-018-0178-y) (PMID:30401826) (PMCID:PMC6220119)