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Tatti, E., Duff, A., Kostrysia, A., Cholet, F., Ijaz, U. and Smith, C. (2022) Potential nitrification activity reflects ammonia oxidising bacteria but not archaea activity across a soil-sediment gradient. Estuarine, Coastal and Shelf Science, 264, 107666. (doi: 10.1016/j.ecss.2021.107666)

Kostrytsia, A., Papirio, S., Khodzhaev, M., Morrison, L., Collins, G., Lens, P. N.L., Ijaz, U. Z. and Esposito, G. (2022) Biofilm carrier type affects biogenic sulfur-driven denitrification performance and microbial community dynamics in moving-bed biofilm reactors. Chemosphere, 287(Part 1), 131975. (doi: 10.1016/j.chemosphere.2021.131975)

Singh, S., Rinta-Kanto, J. M., Lens, P. N. L., Kokko, M., Rintala, J., O’Flaherty, V., Ijaz, U. Z. and Collins, G. (2022) Microbial community assembly and dynamics in granular, fixed-biofilm and planktonic microbiomes valorizing long-chain fatty acids at 20ºC. Bioresource Technology, 343, 126098. (doi: 10.1016/j.biortech.2021.126098) (PMID:34626764)

Gkikas, K. et al. (2021) Dietary triggers of gut inflammation following exclusive enteral nutrition in children with Crohn’s disease: a pilot study. BMC Gastroenterology, (Accepted for Publication)

Mills, S., Trego, A. C., Lens, P. N.L., Ijaz, U. and Collins, G. (2021) A distinct, flocculent, acidogenic microbial community accompanies methanogenic granules in anaerobic digesters. Microbiology Spectrum, (Accepted for Publication)

Nikolova, C., Ijaz, U. Z. and Gutierrez, T. (2021) Exploration of marine bacterioplankton community assembly mechanisms during chemical dispersant and surfactant‐assisted oil biodegradation. Ecology and Evolution, 11(20), pp. 13862-13874. (doi: 10.1002/ece3.8091) (PMCID:PMC8525123)

Cheaib, B. et al. (2021) Genome erosion and evidence for an intracellular niche – exploring the biology of mycoplasmas in Atlantic salmon. Aquaculture, 541, 736772. (doi: 10.1016/j.aquaculture.2021.736772) (PMID:34471330) (PMCID:PMC8192413)

Keating, C. , Bolton-Warberg, M., Hinchcliffe, J., Davies, R., Whelan, S., Wan, A.H.L., Fitzgerald, R.D., Davies, S.J., Ijaz, U.Z. and Smith, C.J. (2021) Temporal changes in the gut microbiota in farmed Atlantic cod (Gadus morhua) outweigh the response to diet supplementation with macroalgae. Animal Microbiome, 3, 7. (doi: 10.1186/s42523-020-00065-1) (PMID:33500003) (PMCID:PMC7934267)

Trego, A. C., Conall Holohan, B., Keating, C. , Graham, A., O'Connor, S., Gerardo, M., Hughes, D., Ijaz, U. Z. and O'Flaherty, V. (2021) First proof of concept for full-scale, direct, low-temperature anaerobic treatment of municipal wastewater. Bioresource technology, 341, 125786. (doi: 10.1016/j.biortech.2021.125786) (PMID:34523560)

Mittell, E. A., Cobbold, C. A. , Ijaz, U. Z. , Kilbride, E. A., Moore, K. A. and Mable, B. K. (2020) Feral populations of Brassica oleracea along Atlantic coasts in western Europe. Ecology and Evolution, 10(20), pp. 11810-11825. (doi: 10.1002/ece3.6821) (PMID:33145003) (PMCID:PMC7593181)

Trego, A. C., O'Sullivan, S., Quince, C., Mills, S., Ijaz, U. Z. and Collins, G. (2020) Size shapes the active microbiome of the methanogenic granules, corroborating a biofilm life cycle. mSystems, 5(5), e00323-20. (doi: 10.1128/mSystems.00323-20) (PMID:32994285)

McKenna, A. et al. (2020) Impact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce Campylobacter. Microbiome, 8, 128. (doi: 10.1186/s40168-020-00908-8) (PMID:32907634) (PMCID:PMC7488076)

Trego, A. C. et al. (2020) Growth and break-up of methanogenic granules suggests mechanisms for biofilm and community development. Frontiers in Microbiology, 11, 1126. (doi: 10.3389/fmicb.2020.01126) (PMID:32582085) (PMCID:PMC7285868)

Cholet, F., Ijaz, U. Z. and Smith, C. J. (2020) Reverse transcriptase enzyme and priming strategy affect quantification and diversity of environmental transcripts. Environmental Microbiology, 22(6), pp. 2383-2402. (doi: 10.1111/1462-2920.15017) (PMID:32285609)

Logan, M. et al. (2020) Analysis of 61 exclusive enteral nutrition formulas used in management of active Crohn's disease - new insights into dietary disease triggers. Alimentary Pharmacology and Therapeutics, 51(10), pp. 935-947. (doi: 10.1111/apt.15695) (PMID:32249975)

Heys, C. , Cheaib, B. , Busetti, A., Kazlauskaite, R., Maier, L., Sloan, W.T. , Ijaz, U.Z. , Kaufmann, J., McGinnity, P. and Llewellyn, M.S. (2020) Neutral processes dominate microbial community assembly in Atlantic salmon, Salmo salar. Applied and Environmental Microbiology, 86(8), e02283-19. (doi: 10.1128/AEM.02283-19) (PMID:32033945) (PMCID:PMC7117918)

Cheaib, B. , Seghouani, H., Ijaz, U. and Derome, N. (2020) Community recovery dynamics in yellow perch microbiome after gradual and constant metallic perturbations. Microbiome, 8, 14. (doi: 10.1186/s40168-020-0789-0) (PMID:32041654) (PMCID:PMC7011381)

Jukes, C., Ijaz, U. Z. , Buckley, A., Spencer, J., Irvine, J., Li, J. V., Marchesi, J. R., Candlish, D. and Douce, G. (2020) Bile salt metabolism is not the only factor contributing to Clostridioides (Clostridium) difficile disease severity in the murine model of disease. Gut Microbes, 11(3), pp. 481-496. (doi: 10.1080/19490976.2019.1678996) (PMID:31793403) (PMCID:PMC7524298)

Frau, A. et al. (2019) DNA extraction and amplicon production strategies deeply inf luence the outcome of gut mycobiome studies. Scientific Reports, 9, 9328. (doi: 10.1038/s41598-019-44974-x) (PMID:31249384) (PMCID:PMC6597572)

Trego, A. C. et al. (2019) De novo growth of methanogenic granules indicates a biofilm life-cycle with complex ecology. bioRxiv, (doi: 10.1101/667386) (Submitted)

This list was generated on Tue Nov 30 09:37:19 2021 GMT.