A knockout screen of ApiAP2 genes reveals networks of interacting transcriptional regulators controlling the Plasmodium life cycle

Modrzynska, K. et al. (2017) A knockout screen of ApiAP2 genes reveals networks of interacting transcriptional regulators controlling the Plasmodium life cycle. Cell Host and Microbe, 21(1), pp. 11-22. (doi: 10.1016/j.chom.2016.12.003) (PMID:28081440) (PMCID:PMC5241200)

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Abstract

A family of apicomplexa-specific proteins containing AP2 DNA-binding domains (ApiAP2s) was identified in malaria parasites. This family includes sequence-specific transcription factors that are key regulators of development. However, functions for the majority of ApiAP2 genes remain unknown. Here, a systematic knockout screen in Plasmodium berghei identified ten ApiAP2 genes that were essential for mosquito transmission: four were critical for the formation of infectious ookinetes, and three were required for sporogony. We describe non-essential functions for AP2-O and AP2-SP proteins in blood stages, and identify AP2-G2 as a repressor active in both asexual and sexual stages. Comparative transcriptomics across mutants and developmental stages revealed clusters of co-regulated genes with shared cis promoter elements, whose expression can be controlled positively or negatively by different ApiAP2 factors. We propose that stage-specific interactions between ApiAP2 proteins on partly overlapping sets of target genes generate the complex transcriptional network that controls the Plasmodium life cycle.

Item Type:Articles
Additional Information:Work at the Sanger Institute was funded by grants from the Wellcome Trust (098051) and the Medical Research Council (G0501670).
Status:Published
Refereed:Yes
Glasgow Author(s) Enlighten ID:Modrzynska, Dr Katarzyna
Authors: Modrzynska, K., Pfander, C., Chappell, L., Yu, L., Suarez, C., Dundas, K., Gomes, A. R., Goulding, D., Rayner, J. C., Choudhary, J., and Billker, O.
College/School:College of Medical Veterinary and Life Sciences > School of Infection & Immunity
Journal Name:Cell Host and Microbe
Publisher:Elsevier
ISSN:1931-3128
ISSN (Online):1934-6069
Published Online:11 January 2017
Copyright Holders:Copyright © 2017 The Authors
First Published:First published in Cell Host and Microbe 21(1):11-22
Publisher Policy:Reproduced under a Creative Commons License

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