Jakubowska, J., Hunt, E., Chalmers, M., McBride, M. and Dominiczak, A. F. (2007) VisGenome: visualization of single and comparative genome representations. Bioinformatics, 23(19), pp. 2641-2642. (doi: 10.1093/bioinformatics/btm394)
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Abstract
VisGenome visualizes single and comparative representations for the rat, the mouse and the human chromosomes at different levels of detail. The tool offers smooth zooming and panning which is more flexible than seen in other browsers. It presents information available in Ensembl for single chromosomes, as well as homologies (orthologue predictions including ortholog one2one, apparent ortholog one2one, ortholog many2many) for any two chromosomes from different species. The application can query supporting data from Ensembl by invoking a link in a browser.
Item Type: | Articles |
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Status: | Published |
Refereed: | Yes |
Glasgow Author(s) Enlighten ID: | McBride, Dr Martin and Chalmers, Professor Matthew and Dominiczak, Professor Anna |
Authors: | Jakubowska, J., Hunt, E., Chalmers, M., McBride, M., and Dominiczak, A. F. |
College/School: | College of Medical Veterinary and Life Sciences > School of Cardiovascular & Metabolic Health College of Science and Engineering > School of Computing Science |
Journal Name: | Bioinformatics |
Publisher: | Oxford University Press |
ISSN: | 1367-4803 |
ISSN (Online): | 1460-2059 |
Copyright Holders: | Copyright © 2007 The Authors |
First Published: | First published in Bioinformatics 23(19):2641-2642 |
Publisher Policy: | Reproduced under a Creative Commons License |
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